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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918047.1_cds_XP_016467563.1_60297
CDS Infomation

[gene=LOC107790176] [db_xref=GeneID:107790176] [protein=aspartyl protease AED1-like] [protein_id=XP_016467563.1] [location=join(112978..113134,113345..114525)] [gbkey=CDS]
Sequence

ATGGCTTGGATCATTAAACATATTTCCACATGCTTGTTTTTGGTGTATTACTTAACACTG
CCTATTTATGGAGAGGCAATCAGAGCAGCACCTCACTATAAGGTGGTTAATGTCAGCTCC
TTGGAGCCAAAACCCTACTGCCAAAGGTCAAGCTCAGGTCCAAAAATCGGATCGCAGAAA
TTGGAAATCGTATCTAGATATGGACCTTGCTTTCCAAATGCTAGTCGAACGAAAACTCCA
TCATCCAACGAACTTCTAAATTGGGATCAAGCTAGAGTTCGTTCAATCAATAAAAGAGTT
AATGACCACCTTTACAGTAATGATCCGGTTAATTATAATTATGGGTCCTATACAGTAAAG
GTAAGTCTTGGCACACCACGACAAGACTATCACTTAATGGTGGATACTGGTAGTGAATCG
AGTTGGGTACGTTGCCAATCTTGCACTAAAGGTTGCAAATCAGACGATTCTCTGTACAAT
CCTTCAAACTCTTTGACATATACAAACAGTTCGTGCAATGGTATATTTAACGTCATTTAT
GGTGATAACTCGTATACAAATGGTACTTGGGGATGTGATATTCTCATTATAGATGGTTTT
GGTGCAATAATGAACTTCCGATTTGGTTGTGGCCAAGAAAATGTTGATGAAACTGGCAAT
AACTTTGGTGATGCAGCTGGAATACTTGGACTTGGCAGAGGTGAGTTATCTTTACCATCT
CAAAGTGATTCGTCAATGAAAATGTTTAGCTATTTTATCCCATTAACAAATAGCCTTGTT
GGAAATATGTATTTTGGGACGGAAGTGCTAAAAATATTGTACACTTGTTCATTCCAATTT
ACACCATTGGTAAAAGGCCCCGAACCAGTATACTACTATCTTGACCTAGTTGGAATAAGT
GTAGCTGGAAATAAACTCAACGTCCCGTCGATAACATTCACTAATGAAGGAACAATTATA
GACAGTGGAACGGTAATCACTCGATTGCCACAGGTGGTTTACTCTGCACTTCGTACTGCA
TTTAGAGAGTCCATGTTGAGTTACACATTATTAGAAAATGTTGATGAGCTGATGGACACC
TGCTACAGCTTCAATGGATACGAACAAATTGCTTTACCAGAGATTAAATTCCATTTTGGA
GAAGGAACTAGTACTACTACTGATGTGAAGTTGTCAAACAATGGGATTTTATGGATGAAA
GATGATAGAGTGAAATGTTTGGCTTTTTCTGCAACGGAAAGCTATAGCATTATTGGTAAC
GTTCAGCAGCGAGGAATGAATGTGATTTATGATTTGAAAGGGGAAAGAATTGGATTTGCT
AGTAACTGTGATAGCTGA

Peptide Sequence

PEP ID

XP_016467563.1
PEP Infomation

PREDICTED: aspartyl protease AED1-like [Nicotiana tabacum]
Sequence

MAWIIKHISTCLFLVYYLTLPIYGEAIRAAPHYKVVNVSSLEPKPYCQRSSSGPKIGSQK
LEIVSRYGPCFPNASRTKTPSSNELLNWDQARVRSINKRVNDHLYSNDPVNYNYGSYTVK
VSLGTPRQDYHLMVDTGSESSWVRCQSCTKGCKSDDSLYNPSNSLTYTNSSCNGIFNVIY
GDNSYTNGTWGCDILIIDGFGAIMNFRFGCGQENVDETGNNFGDAAGILGLGRGELSLPS
QSDSSMKMFSYFIPLTNSLVGNMYFGTEVLKILYTCSFQFTPLVKGPEPVYYYLDLVGIS
VAGNKLNVPSITFTNEGTIIDSGTVITRLPQVVYSALRTAFRESMLSYTLLENVDELMDT
CYSFNGYEQIALPEIKFHFGEGTSTTTDVKLSNNGILWMKDDRVKCLAFSATESYSIIGN
VQQRGMNVIYDLKGERIGFASNCDS

Transcript Sequence

Gene sequence data has not been registered.